Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF103-CHMP3A0A140T963 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC007967.3-201ENST00000434308 558 ntBASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC011498.5-201ENST00000592027 486 ntBASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC124864.1-201ENST00000623408 392 ntBASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF103-CHMP3A0A140T963 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms