Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 AC091304.2-201ENST00000564639 760 ntBASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 PRELID1P1-202ENST00000567272 903 ntBASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP46A1Q9Y6A2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 AC243591.1-201ENST00000452967 1364 ntBASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 AL021920.2-201ENST00000624828 1351 ntBASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 AL589182.2-201ENST00000619332 1049 ntBASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.21■□□□□ 0.83
CYP46A1Q9Y6A2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CYP46A1Q9Y6A2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 FGFR3P6-201ENST00000457012 610 ntBASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 TERC-201ENST00000602385 541 ntBASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 AC008608.2-201ENST00000606089 416 ntBASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 PCDHB19P-201ENST00000570871 2371 ntBASIC20.2■□□□□ 0.82
CYP46A1Q9Y6A2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms