Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 AL359881.2-201ENST00000602973 570 ntBASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 SNX33P1-201ENST00000592116 1762 ntBASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 AC135050.7-201ENST00000624508 2218 ntBASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CDC42BPBQ9Y5S2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 AC132938.2-201ENST00000579188 680 ntBASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 AL591163.1-201ENST00000641757 987 ntBASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 MIR1909-201ENST00000411312 80 ntBASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDC42BPBQ9Y5S2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 SPTSSB-204ENST00000617024 1292 ntBASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC25.33■■□□□ 1.65
CDC42BPBQ9Y5S2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CDC42BPBQ9Y5S2 AC138969.3-201ENST00000546612 1459 ntBASIC25.33■■□□□ 1.64
CDC42BPBQ9Y5S2 AC138932.2-201ENST00000548268 1459 ntBASIC25.33■■□□□ 1.64
CDC42BPBQ9Y5S2 AC126755.4-201ENST00000549796 1459 ntBASIC25.33■■□□□ 1.64
CDC42BPBQ9Y5S2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CDC42BPBQ9Y5S2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CDC42BPBQ9Y5S2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CDC42BPBQ9Y5S2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 AC105021.1-202ENST00000570572 669 ntBASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 SLC7A15P-201ENST00000424028 1363 ntBASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 GPR53P-205ENST00000457298 1084 ntBASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 AC007431.3-201ENST00000623221 587 ntBASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDC42BPBQ9Y5S2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC25.31■■□□□ 1.64
CDC42BPBQ9Y5S2 AL589739.1-201ENST00000607720 493 ntBASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms