Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA6Q9Y5G7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 MCCD1P2-201ENST00000423228 335 ntBASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 SIGLEC30P-201ENST00000455569 941 ntBASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGA6Q9Y5G7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 KLF4P1-201ENST00000412782 1185 ntBASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 AC019129.2-201ENST00000609837 1235 ntBASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHGA6Q9Y5G7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC006504.4-201ENST00000592118 1568 ntBASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC002310.6-201ENST00000624451 1377 ntBASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms