Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 SCARNA2-201ENST00000458748 420 ntBASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 AF238378.1-201ENST00000526806 358 ntBASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 AC139887.3-201ENST00000568585 713 ntBASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 IFNL4P1-201ENST00000607083 540 ntBASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.13■□□□□ 0.33
TCAF1Q9Y4C2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AC004706.3-202ENST00000621574 984 ntBASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AL645728.1-201ENST00000366221 2101 ntBASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AL021920.2-201ENST00000624828 1351 ntBASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.12■□□□□ 0.33
TCAF1Q9Y4C2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 KRT18P56-201ENST00000507275 550 ntBASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 AC025062.2-201ENST00000605477 670 ntBASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCAF1Q9Y4C2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCAF1Q9Y4C2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TCAF1Q9Y4C2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCAF1Q9Y4C2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms