Protein–RNA interactions for Protein: Q9Y448

KNSTRN, Small kinetochore-associated protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRNQ9Y448 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 AL513480.1-201ENST00000451731 511 ntBASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 AC023141.13-201ENST00000604991 943 ntBASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 AC007064.4-201ENST00000637740 555 ntBASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
KNSTRNQ9Y448 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 AC025580.3-201ENST00000617932 1424 ntBASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 TUBB8P12-201ENST00000308911 1335 ntBASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 TUBB7P-202ENST00000428444 1305 ntBASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 TUBB8P7-204ENST00000567960 1332 ntBASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 KRT19P2-202ENST00000557173 1012 ntBASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 AC005412.3-201ENST00000580309 715 ntBASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
KNSTRNQ9Y448 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 AC002347.1-201ENST00000569543 541 ntBASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KNSTRNQ9Y448 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 AC004832.2-201ENST00000426397 482 ntBASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 AL353732.1-201ENST00000569618 1459 ntBASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KNSTRNQ9Y448 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms