Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 AC140912.1-201ENST00000577171 1054 ntBASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF3Q9ULT6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 AC098614.1-201ENST00000368528 745 ntBASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 AL353705.2-201ENST00000428243 662 ntBASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 CETN4P-206ENST00000642099 2168 ntBASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF3Q9ULT6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 TNXA-203ENST00000507684 2038 ntBASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 ABALON-201ENST00000629058 1903 ntBASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 AC133963.1-201ENST00000504166 1679 ntBASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 RPL37AP1-201ENST00000412502 279 ntBASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 PRYP6-201ENST00000514804 343 ntBASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 MIR4492-201ENST00000581627 80 ntBASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 AL355312.1-201ENST00000407115 2176 ntBASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF3Q9ULT6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNRF3Q9ULT6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms