Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 TSPY19P-201ENST00000418461 509 ntBASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 TSPY18P-201ENST00000441642 509 ntBASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 MINOS1P3-201ENST00000457048 203 ntBASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 AC138894.3-201ENST00000603787 634 ntBASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 AL365203.3-201ENST00000609742 2057 ntBASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 AC092171.3-201ENST00000610122 2651 ntBASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.42■□□□□ 0.22
CNOT11Q9UKZ1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 BNIP3P18-201ENST00000593976 575 ntBASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CNOT11Q9UKZ1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AC104640.1-201ENST00000562617 2109 ntBASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AC005104.2-201ENST00000427818 678 ntBASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AL138831.2-201ENST00000606564 490 ntBASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AL732292.2-201ENST00000609649 430 ntBASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AL121772.3-201ENST00000610840 674 ntBASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT11Q9UKZ1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT11Q9UKZ1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT11Q9UKZ1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT11Q9UKZ1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNOT11Q9UKZ1 AC024909.3-201ENST00000611513 2257 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms