Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.33■□□□□ 0.21
NIPSNAP3AQ9UFN0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
NIPSNAP3AQ9UFN0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NIPSNAP3AQ9UFN0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.33■□□□□ 0.21
NIPSNAP3AQ9UFN0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NIPSNAP3AQ9UFN0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 FAM220CP-201ENST00000395253 831 ntBASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 STK25P1-201ENST00000585406 838 ntBASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 HYMAI.1-201ENST00000620949 238 ntBASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC125634.1-201ENST00000438758 1403 ntBASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL662844.4-201ENST00000606367 2838 ntBASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 KRT18P57-201ENST00000443599 1254 ntBASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC006449.5-201ENST00000610658 2098 ntBASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPSNAP3AQ9UFN0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL135999.2-201ENST00000622438 1686 ntBASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 LINC02199-201ENST00000506655 2702 ntBASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC005521.1-201ENST00000393351 872 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms