Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 AL359736.2-201ENST00000621992 437 ntBASIC16.57■□□□□ 0.24
NDE1Q9NXR1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDE1Q9NXR1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 AC126177.1-201ENST00000547829 2218 ntBASIC16.56■□□□□ 0.24
NDE1Q9NXR1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 AP000523.1-201ENST00000398242 1049 ntBASIC16.56■□□□□ 0.24
NDE1Q9NXR1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 AL157888.1-201ENST00000631930 593 ntBASIC16.56■□□□□ 0.24
NDE1Q9NXR1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDE1Q9NXR1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NDE1Q9NXR1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms