Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 KRT18P27-201ENST00000427733 1299 ntBASIC14.6□□□□□ -0.07
GCM1Q9NP62 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 AC105339.3-201ENST00000560043 636 ntBASIC14.6□□□□□ -0.07
GCM1Q9NP62 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 AL353135.1-201ENST00000606729 504 ntBASIC14.6□□□□□ -0.07
GCM1Q9NP62 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.6□□□□□ -0.07
GCM1Q9NP62 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GCM1Q9NP62 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.59□□□□□ -0.07
GCM1Q9NP62 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GCM1Q9NP62 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 AC126755.1-201ENST00000525846 6405 ntBASIC14.59□□□□□ -0.07
GCM1Q9NP62 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
GCM1Q9NP62 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.58□□□□□ -0.07
GCM1Q9NP62 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.58□□□□□ -0.07
GCM1Q9NP62 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
GCM1Q9NP62 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
GCM1Q9NP62 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
GCM1Q9NP62 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GCM1Q9NP62 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
GCM1Q9NP62 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GCM1Q9NP62 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.58□□□□□ -0.08
GCM1Q9NP62 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCM1Q9NP62 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCM1Q9NP62 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GCM1Q9NP62 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GCM1Q9NP62 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GCM1Q9NP62 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.58□□□□□ -0.08
GCM1Q9NP62 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms