Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 MIR662-201ENST00000384847 95 ntBASIC20.98■□□□□ 0.95
UPF2Q9HAU5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 AC007967.3-201ENST00000434308 558 ntBASIC20.98■□□□□ 0.95
UPF2Q9HAU5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPF2Q9HAU5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 LIN28AP1-201ENST00000429574 405 ntBASIC20.97■□□□□ 0.95
UPF2Q9HAU5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 AL359075.1-203ENST00000462729 1002 ntBASIC20.97■□□□□ 0.95
UPF2Q9HAU5 COX11P1-201ENST00000489116 835 ntBASIC20.97■□□□□ 0.95
UPF2Q9HAU5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.97■□□□□ 0.95
UPF2Q9HAU5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 GPR89P-201ENST00000407924 1495 ntBASIC20.96■□□□□ 0.95
UPF2Q9HAU5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 AC103564.2-201ENST00000432853 1299 ntBASIC20.96■□□□□ 0.95
UPF2Q9HAU5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 AL441883.1-201ENST00000566170 1045 ntBASIC20.96■□□□□ 0.95
UPF2Q9HAU5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 AC022188.1-201ENST00000620960 1664 ntBASIC20.96■□□□□ 0.95
UPF2Q9HAU5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
UPF2Q9HAU5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
UPF2Q9HAU5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.95■□□□□ 0.95
UPF2Q9HAU5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UPF2Q9HAU5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms