Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 GPR89P-201ENST00000407924 1495 ntBASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 AC005521.1-201ENST00000393351 872 ntBASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 FAM220CP-201ENST00000395253 831 ntBASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 VENTXP5-201ENST00000523979 775 ntBASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 STK25P1-201ENST00000585406 838 ntBASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 AC006449.5-201ENST00000610658 2098 ntBASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 MIR600HG-201ENST00000449175 5984 ntBASIC15.1■□□□□ 0.01
COMMD4Q9H0A8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 AC092171.3-201ENST00000610122 2651 ntBASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 STK19B-204ENST00000512515 211 ntBASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 AL049757.1-201ENST00000616842 1596 ntBASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 AC125634.1-201ENST00000438758 1403 ntBASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
COMMD4Q9H0A8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 CYP2T1P-202ENST00000641596 2535 ntBASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
COMMD4Q9H0A8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms