Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 AC073592.4-201ENST00000623827 446 ntBASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 AC079776.2-201ENST00000641154 1609 ntBASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 ACTG1P4-201ENST00000425123 1122 ntBASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 FDX1P1-201ENST00000449115 551 ntBASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 AL732292.2-201ENST00000609649 430 ntBASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 AC006538.3-201ENST00000612495 578 ntBASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 AL645728.1-201ENST00000366221 2101 ntBASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UPF3BQ9BZI7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 LINC00982-205ENST00000420957 435 ntBASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 BX005266.1-201ENST00000473402 457 ntBASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 AC012313.10-201ENST00000623509 926 ntBASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 AP005117.1-201ENST00000584346 1413 ntBASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF3BQ9BZI7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UPF3BQ9BZI7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms