Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1LQ96KA5 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.41■□□□□ 0.22
CLPTM1LQ96KA5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1LQ96KA5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1LQ96KA5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLPTM1LQ96KA5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 TSPY12P-201ENST00000421279 868 ntBASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 AC113410.3-201ENST00000623366 203 ntBASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1LQ96KA5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLPTM1LQ96KA5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.39■□□□□ 0.22
CLPTM1LQ96KA5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLPTM1LQ96KA5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CLPTM1LQ96KA5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLPTM1LQ96KA5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 INGX-201ENST00000359239 846 ntBASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 AC096633.1-201ENST00000422446 749 ntBASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 KRT89P-201ENST00000620027 1478 ntBASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLPTM1LQ96KA5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLPTM1LQ96KA5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms