Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 AC092338.2-201ENST00000568827 1415 ntBASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 AC066615.1-201ENST00000640911 628 ntBASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP6Q96FZ7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 CYP2D8P-201ENST00000433633 1490 ntBASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 AL596275.1-201ENST00000423464 877 ntBASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 EGLN1P1-201ENST00000531623 762 ntBASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 AC099063.4-201ENST00000641099 1602 ntBASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CHMP6Q96FZ7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP6Q96FZ7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 AC006538.1-201ENST00000567905 1585 ntBASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP6Q96FZ7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms