Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNED1Q8TER0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 LINC00896-202ENST00000609602 2128 ntBASIC20.51■□□□□ 0.87
SNED1Q8TER0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNED1Q8TER0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNED1Q8TER0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNED1Q8TER0 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 AL080243.2-201ENST00000418783 582 ntBASIC20.51■□□□□ 0.87
SNED1Q8TER0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.51■□□□□ 0.87
SNED1Q8TER0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNED1Q8TER0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNED1Q8TER0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNED1Q8TER0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNED1Q8TER0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 AC004233.3-201ENST00000607794 1269 ntBASIC20.5■□□□□ 0.87
SNED1Q8TER0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SNED1Q8TER0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 ZNF890P-202ENST00000530367 1156 ntBASIC20.49■□□□□ 0.87
SNED1Q8TER0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.49■□□□□ 0.87
SNED1Q8TER0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 AL355312.1-201ENST00000407115 2176 ntBASIC20.49■□□□□ 0.87
SNED1Q8TER0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNED1Q8TER0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 AC087499.5-201ENST00000452760 1342 ntBASIC20.48■□□□□ 0.87
SNED1Q8TER0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 FAM220BP-201ENST00000377689 816 ntBASIC20.48■□□□□ 0.87
SNED1Q8TER0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 AC140912.1-201ENST00000577171 1054 ntBASIC20.48■□□□□ 0.87
SNED1Q8TER0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 CYP2A7P1-201ENST00000595391 815 ntBASIC20.48■□□□□ 0.87
SNED1Q8TER0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNED1Q8TER0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.48■□□□□ 0.87
SNED1Q8TER0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms