Protein–RNA interactions for Protein: Q8TDC3

BRSK1, Serine/threonine-protein kinase BRSK1, humanhuman

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRSK1Q8TDC3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 AC073621.1-201ENST00000392730 636 ntBASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 ELK2BP-201ENST00000415014 1224 ntBASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 FAM215A-202ENST00000632077 792 ntBASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRSK1Q8TDC3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 AC105339.3-201ENST00000560043 636 ntBASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 PGM5P2-202ENST00000637225 1043 ntBASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 HLA-A-201ENST00000376802 1334 ntBASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 PI4KAP1-204ENST00000612579 1703 ntBASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRSK1Q8TDC3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 PCDHB17P-201ENST00000539533 2393 ntBASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 AC011676.5-201ENST00000624864 2660 ntBASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 AC136632.2-201ENST00000512891 861 ntBASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRSK1Q8TDC3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.08■□□□□ 0.33
BRSK1Q8TDC3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.08■□□□□ 0.33
BRSK1Q8TDC3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.08■□□□□ 0.33
BRSK1Q8TDC3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BRSK1Q8TDC3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms