Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 MPDU1-223ENST00000582151 728 ntBASIC18.22■□□□□ 0.51
LMO3Q8TAP4 SLC25A6P4-201ENST00000586535 553 ntBASIC18.22■□□□□ 0.51
LMO3Q8TAP4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 AL773604.1-201ENST00000617417 272 ntBASIC18.22■□□□□ 0.51
LMO3Q8TAP4 GGTLC5P-201ENST00000617623 998 ntBASIC18.22■□□□□ 0.51
LMO3Q8TAP4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 SLC22A20-204ENST00000530038 1673 ntBASIC18.22■□□□□ 0.51
LMO3Q8TAP4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LMO3Q8TAP4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 AC117500.6-201ENST00000624871 588 ntBASIC18.21■□□□□ 0.51
LMO3Q8TAP4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 AL139011.1-202ENST00000642063 584 ntBASIC18.21■□□□□ 0.51
LMO3Q8TAP4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.21■□□□□ 0.51
LMO3Q8TAP4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.5
LMO3Q8TAP4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 PCDHB19P-201ENST00000570871 2371 ntBASIC18.2■□□□□ 0.5
LMO3Q8TAP4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 PMS2P1-201ENST00000431037 1228 ntBASIC18.2■□□□□ 0.5
LMO3Q8TAP4 AC009078.2-202ENST00000463353 338 ntBASIC18.2■□□□□ 0.5
LMO3Q8TAP4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMO3Q8TAP4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 RPS2P28-201ENST00000314255 741 ntBASIC18.19■□□□□ 0.5
LMO3Q8TAP4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 AC006538.1-201ENST00000567905 1585 ntBASIC18.19■□□□□ 0.5
LMO3Q8TAP4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 MIR1199-201ENST00000621445 119 ntBASIC18.19■□□□□ 0.5
LMO3Q8TAP4 PGM5P2-202ENST00000637225 1043 ntBASIC18.19■□□□□ 0.5
LMO3Q8TAP4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMO3Q8TAP4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms