Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 FAM90A11P-201ENST00000518378 2218 ntBASIC10.54□□□□□ -0.72
SVIPQ8NHG7 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ZNF18-205ENST00000580613 2250 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ICOS-201ENST00000316386 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AC040160.2-201ENST00000623816 1675 ntBASIC10.53□□□□□ -0.72
SVIPQ8NHG7 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 RAP1GAP2-203ENST00000540393 3218 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AC011477.6-201ENST00000604980 1927 ntBASIC10.53□□□□□ -0.72
SVIPQ8NHG7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AC024568.1-201ENST00000517330 2260 ntBASIC10.53□□□□□ -0.72
SVIPQ8NHG7 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AC135782.3-201ENST00000562782 2105 ntBASIC10.53□□□□□ -0.72
SVIPQ8NHG7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
SVIPQ8NHG7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms