Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM48Q8IWZ4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM48Q8IWZ4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.27
TRIM48Q8IWZ4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 VN2R19P-201ENST00000442399 1052 ntBASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM48Q8IWZ4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 BX842568.4-201ENST00000421222 227 ntBASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 PRSS29P-201ENST00000440800 595 ntBASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 AC010654.1-201ENST00000615722 808 ntBASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM48Q8IWZ4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 AC040169.1-201ENST00000565382 521 ntBASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM48Q8IWZ4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms