Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RP1L1Q8IWN7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 KRT8P48-201ENST00000515599 1220 ntBASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RP1L1Q8IWN7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 MIR943-201ENST00000401286 94 ntBASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 AL596325.1-201ENST00000563991 1082 ntBASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 KLF2P3-201ENST00000451977 1087 ntBASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 WASH6P-202ENST00000359512 1437 ntBASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RP1L1Q8IWN7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 BASP1P1-201ENST00000430708 665 ntBASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.41■□□□□ 0.06
RP1L1Q8IWN7 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms