Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 AC009533.2-201ENST00000543664 586 ntBASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 AL138831.2-201ENST00000606564 490 ntBASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 AL121672.3-201ENST00000608644 468 ntBASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 AC011676.5-201ENST00000624864 2660 ntBASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 AL731571.1-201ENST00000617058 5428 ntBASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL55Q7Z7F7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
MRPL55Q7Z7F7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 AL353801.3-201ENST00000609898 542 ntBASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 AL121956.5-201ENST00000625261 221 ntBASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 AC060834.1-201ENST00000443027 2032 ntBASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 AL596257.1-201ENST00000641463 2694 ntBASIC11.02□□□□□ -0.65
MRPL55Q7Z7F7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
MRPL55Q7Z7F7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms