Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CU639417.3-201ENST00000624240 1404 ntBASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 HLA-H-201ENST00000383620 1096 ntBASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 KRT17P7-201ENST00000451704 1104 ntBASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 AC009477.1-201ENST00000452936 217 ntBASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 MIR4492-201ENST00000581627 80 ntBASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 LINC00896-202ENST00000609602 2128 ntBASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 BICD1-207ENST00000551848 1962 ntBASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNKSR3Q6P9H4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.14■□□□□ 0.5
CNKSR3Q6P9H4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNKSR3Q6P9H4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNKSR3Q6P9H4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CNKSR3Q6P9H4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNKSR3Q6P9H4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.14■□□□□ 0.5
CNKSR3Q6P9H4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AL353705.2-201ENST00000428243 662 ntBASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 PRYP6-201ENST00000514804 343 ntBASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 MIR6752-201ENST00000618442 71 ntBASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 AC093525.9-201ENST00000624961 1746 ntBASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNKSR3Q6P9H4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms