Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 EGFEM1P-202ENST00000431685 1563 ntBASIC16.11■□□□□ 0.17
LPCAT4Q643R3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 AL596087.1-201ENST00000400979 1969 ntBASIC16.11■□□□□ 0.17
LPCAT4Q643R3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LPCAT4Q643R3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 AC113404.2-201ENST00000507884 177 ntBASIC16.1■□□□□ 0.17
LPCAT4Q643R3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 AC022532.1-201ENST00000624563 1728 ntBASIC16.1■□□□□ 0.17
LPCAT4Q643R3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.1■□□□□ 0.17
LPCAT4Q643R3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 ESRRAP1-201ENST00000400596 1257 ntBASIC16.09■□□□□ 0.17
LPCAT4Q643R3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 SEC1P-202ENST00000473944 940 ntBASIC16.09■□□□□ 0.17
LPCAT4Q643R3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms