Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATPAF1Q5TC12 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 AP005901.3-202ENST00000581653 237 ntBASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATPAF1Q5TC12 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 COX5BP2-201ENST00000392354 334 ntBASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 POM121L3P-201ENST00000419331 1163 ntBASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 AC091607.1-201ENST00000490318 1060 ntBASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 AC104819.1-201ENST00000504587 486 ntBASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.84□□□□□ -0.03
ATPAF1Q5TC12 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms