Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 AC091076.1-201ENST00000610741 619 ntBASIC16.63■□□□□ 0.25
SGO1Q5FBB7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 AC138894.3-201ENST00000603787 634 ntBASIC16.62■□□□□ 0.25
SGO1Q5FBB7 AC010331.1-201ENST00000611423 582 ntBASIC16.62■□□□□ 0.25
SGO1Q5FBB7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 AC148477.5-201ENST00000625164 1645 ntBASIC16.62■□□□□ 0.25
SGO1Q5FBB7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SGO1Q5FBB7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 PMPCAP1-201ENST00000508114 1576 ntBASIC16.61■□□□□ 0.25
SGO1Q5FBB7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 MIR1224-201ENST00000408193 85 ntBASIC16.61■□□□□ 0.25
SGO1Q5FBB7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 AC012615.1-201ENST00000565797 1299 ntBASIC16.61■□□□□ 0.25
SGO1Q5FBB7 MIR5100-201ENST00000579544 119 ntBASIC16.61■□□□□ 0.25
SGO1Q5FBB7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
SGO1Q5FBB7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SGO1Q5FBB7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SGO1Q5FBB7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SGO1Q5FBB7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms