Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTPN20Q4JDL3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 AP001005.1-201ENST00000571755 1248 ntBASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 AC116407.3-201ENST00000623905 1129 ntBASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 AC099398.1-201ENST00000567919 2776 ntBASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 HLA-A-201ENST00000376802 1334 ntBASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN20Q4JDL3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 AL021920.2-201ENST00000624828 1351 ntBASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 KRT8P49-201ENST00000604166 1432 ntBASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 AC098831.1-202ENST00000438821 336 ntBASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 AL662844.1-201ENST00000546340 181 ntBASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 AC005593.1-201ENST00000624894 515 ntBASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPN20Q4JDL3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 AC108073.2-201ENST00000464002 357 ntBASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.9■□□□□ 0.46
PTPN20Q4JDL3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms