Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.52■□□□□ 0.72
USH1GQ495M9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 AP006288.1-201ENST00000446065 395 ntBASIC19.52■□□□□ 0.72
USH1GQ495M9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.52■□□□□ 0.72
USH1GQ495M9 AP002472.1-201ENST00000577490 586 ntBASIC19.52■□□□□ 0.72
USH1GQ495M9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.52■□□□□ 0.72
USH1GQ495M9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.52■□□□□ 0.72
USH1GQ495M9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USH1GQ495M9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
USH1GQ495M9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.52■□□□□ 0.72
USH1GQ495M9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USH1GQ495M9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
USH1GQ495M9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USH1GQ495M9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.52■□□□□ 0.71
USH1GQ495M9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USH1GQ495M9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
USH1GQ495M9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.51■□□□□ 0.71
USH1GQ495M9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.51■□□□□ 0.71
USH1GQ495M9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.51■□□□□ 0.71
USH1GQ495M9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.51■□□□□ 0.71
USH1GQ495M9 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.51■□□□□ 0.71
USH1GQ495M9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.51■□□□□ 0.71
USH1GQ495M9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.51■□□□□ 0.71
USH1GQ495M9 AC092902.6-201ENST00000641783 218 ntBASIC19.51■□□□□ 0.71
USH1GQ495M9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.51■□□□□ 0.71
USH1GQ495M9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 AC092053.1-201ENST00000605787 1936 ntBASIC19.51■□□□□ 0.71
USH1GQ495M9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USH1GQ495M9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 AC139713.2-201ENST00000641328 2723 ntBASIC19.5■□□□□ 0.71
USH1GQ495M9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.5■□□□□ 0.71
USH1GQ495M9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
USH1GQ495M9 SNHG9-202ENST00000564014 471 ntBASIC19.5■□□□□ 0.71
USH1GQ495M9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.5■□□□□ 0.71
USH1GQ495M9 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.5■□□□□ 0.71
USH1GQ495M9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
USH1GQ495M9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.5■□□□□ 0.71
USH1GQ495M9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USH1GQ495M9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.49■□□□□ 0.71
USH1GQ495M9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
USH1GQ495M9 PCDHB18P-201ENST00000524813 2368 ntBASIC19.49■□□□□ 0.71
USH1GQ495M9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
USH1GQ495M9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USH1GQ495M9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.49■□□□□ 0.71
USH1GQ495M9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USH1GQ495M9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.49■□□□□ 0.71
USH1GQ495M9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.49■□□□□ 0.71
USH1GQ495M9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
USH1GQ495M9 AC005412.3-201ENST00000580309 715 ntBASIC19.49■□□□□ 0.71
USH1GQ495M9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.49■□□□□ 0.71
USH1GQ495M9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USH1GQ495M9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms