Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 AC008267.7-201ENST00000624570 1194 ntBASIC20.28■□□□□ 0.84
PDS5AQ29RF7 LINC00628-201ENST00000628516 1289 ntBASIC20.28■□□□□ 0.84
PDS5AQ29RF7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 AL023806.1-201ENST00000603994 1649 ntBASIC20.28■□□□□ 0.84
PDS5AQ29RF7 AC006277.1-201ENST00000624348 1610 ntBASIC20.28■□□□□ 0.84
PDS5AQ29RF7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.28■□□□□ 0.84
PDS5AQ29RF7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 AC005237.2-201ENST00000434368 219 ntBASIC20.27■□□□□ 0.84
PDS5AQ29RF7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 AP001059.3-201ENST00000619053 235 ntBASIC20.27■□□□□ 0.84
PDS5AQ29RF7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 AC016027.1-202ENST00000607927 1699 ntBASIC20.27■□□□□ 0.84
PDS5AQ29RF7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.27■□□□□ 0.84
PDS5AQ29RF7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 KRT18P32-201ENST00000424695 1287 ntBASIC20.27■□□□□ 0.83
PDS5AQ29RF7 FAM58DP-201ENST00000428076 619 ntBASIC20.27■□□□□ 0.83
PDS5AQ29RF7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 AC025678.2-201ENST00000562061 970 ntBASIC20.27■□□□□ 0.83
PDS5AQ29RF7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.27■□□□□ 0.83
PDS5AQ29RF7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDS5AQ29RF7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms