Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 LINC01311-201ENST00000565162 1445 ntBASIC10.78□□□□□ -0.68
RBM3P98179 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 OR2A1-AS1-201ENST00000462305 773 ntBASIC10.78□□□□□ -0.68
RBM3P98179 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC10.78□□□□□ -0.68
RBM3P98179 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC10.78□□□□□ -0.68
RBM3P98179 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 NBPF21P-201ENST00000425093 1451 ntBASIC10.78□□□□□ -0.68
RBM3P98179 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 AC132938.6-201ENST00000623828 1655 ntBASIC10.78□□□□□ -0.68
RBM3P98179 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC10.78□□□□□ -0.68
RBM3P98179 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.78□□□□□ -0.68
RBM3P98179 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RBM3P98179 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC10.77□□□□□ -0.68
RBM3P98179 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
RBM3P98179 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RBM3P98179 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC10.77□□□□□ -0.68
RBM3P98179 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RBM3P98179 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC10.77□□□□□ -0.68
RBM3P98179 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RBM3P98179 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RBM3P98179 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.77□□□□□ -0.68
RBM3P98179 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RBM3P98179 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
RBM3P98179 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC10.77□□□□□ -0.68
RBM3P98179 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RBM3P98179 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
RBM3P98179 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 AL024508.2-201ENST00000607749 1894 ntBASIC10.77□□□□□ -0.69
RBM3P98179 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
RBM3P98179 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC10.77□□□□□ -0.69
RBM3P98179 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RBM3P98179 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
RBM3P98179 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC10.77□□□□□ -0.69
RBM3P98179 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC10.77□□□□□ -0.69
RBM3P98179 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC10.77□□□□□ -0.69
RBM3P98179 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC10.77□□□□□ -0.69
RBM3P98179 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 MDK-213ENST00000617138 635 ntTSL 2 BASIC10.77□□□□□ -0.69
RBM3P98179 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.77□□□□□ -0.69
RBM3P98179 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
RBM3P98179 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RBM3P98179 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms