Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H3AP68431 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HIST1H3AP68431 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 UNC93B7-201ENST00000509439 705 ntBASIC14.9□□□□□ -0.02
HIST1H3AP68431 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H3AP68431 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HIST1H3AP68431 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 AC107918.4-202ENST00000641623 219 ntBASIC14.89□□□□□ -0.03
HIST1H3AP68431 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 KRT8P49-201ENST00000604166 1432 ntBASIC14.89□□□□□ -0.03
HIST1H3AP68431 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 CROCCP1-201ENST00000426910 5675 ntBASIC14.89□□□□□ -0.03
HIST1H3AP68431 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H3AP68431 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H3AP68431 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 LINC00895-201ENST00000629028 1637 ntBASIC14.88□□□□□ -0.03
HIST1H3AP68431 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H3AP68431 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H3AP68431 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms