Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SPCS3P61009 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.94□□□□□ -0.18
SPCS3P61009 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SPCS3P61009 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SPCS3P61009 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPCS3P61009 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 LINC02199-201ENST00000506655 2702 ntBASIC13.93□□□□□ -0.18
SPCS3P61009 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.93□□□□□ -0.18
SPCS3P61009 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SPCS3P61009 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 AL359075.1-203ENST00000462729 1002 ntBASIC13.93□□□□□ -0.18
SPCS3P61009 AC092597.1-201ENST00000487352 616 ntBASIC13.93□□□□□ -0.18
SPCS3P61009 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.93□□□□□ -0.18
SPCS3P61009 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.93□□□□□ -0.18
SPCS3P61009 AC109462.3-201ENST00000573934 613 ntBASIC13.93□□□□□ -0.18
SPCS3P61009 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.93□□□□□ -0.18
SPCS3P61009 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SPCS3P61009 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPCS3P61009 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.93□□□□□ -0.18
SPCS3P61009 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SPCS3P61009 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.92□□□□□ -0.18
SPCS3P61009 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPCS3P61009 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms