Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.8■□□□□ 0.44
ERVFC1P60507 AL596325.1-201ENST00000563991 1082 ntBASIC17.8■□□□□ 0.44
ERVFC1P60507 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.8■□□□□ 0.44
ERVFC1P60507 MPDU1-223ENST00000582151 728 ntBASIC17.8■□□□□ 0.44
ERVFC1P60507 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.8■□□□□ 0.44
ERVFC1P60507 AC027307.3-201ENST00000594262 1100 ntBASIC17.8■□□□□ 0.44
ERVFC1P60507 AC003101.2-201ENST00000612557 442 ntBASIC17.8■□□□□ 0.44
ERVFC1P60507 AP001350.2-201ENST00000625104 1094 ntBASIC17.8■□□□□ 0.44
ERVFC1P60507 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERVFC1P60507 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERVFC1P60507 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
ERVFC1P60507 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERVFC1P60507 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERVFC1P60507 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERVFC1P60507 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ERVFC1P60507 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.79■□□□□ 0.44
ERVFC1P60507 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ERVFC1P60507 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.79■□□□□ 0.44
ERVFC1P60507 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ERVFC1P60507 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.79■□□□□ 0.44
ERVFC1P60507 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.79■□□□□ 0.44
ERVFC1P60507 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.79■□□□□ 0.44
ERVFC1P60507 CR383656.12-201ENST00000549567 513 ntBASIC17.79■□□□□ 0.44
ERVFC1P60507 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.79■□□□□ 0.44
ERVFC1P60507 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ERVFC1P60507 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.79■□□□□ 0.44
ERVFC1P60507 SPDYE12P-201ENST00000618416 771 ntBASIC17.79■□□□□ 0.44
ERVFC1P60507 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.79■□□□□ 0.44
ERVFC1P60507 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ERVFC1P60507 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERVFC1P60507 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
ERVFC1P60507 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.78■□□□□ 0.44
ERVFC1P60507 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.78■□□□□ 0.44
ERVFC1P60507 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
ERVFC1P60507 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
ERVFC1P60507 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.78■□□□□ 0.44
ERVFC1P60507 NME2P1-201ENST00000426182 414 ntBASIC17.78■□□□□ 0.44
ERVFC1P60507 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.78■□□□□ 0.44
ERVFC1P60507 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.78■□□□□ 0.44
ERVFC1P60507 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.78■□□□□ 0.44
ERVFC1P60507 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.78■□□□□ 0.44
ERVFC1P60507 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.78■□□□□ 0.44
ERVFC1P60507 AL008721.1-201ENST00000609964 604 ntBASIC17.78■□□□□ 0.44
ERVFC1P60507 AC009118.2-201ENST00000613275 655 ntBASIC17.78■□□□□ 0.44
ERVFC1P60507 AL138828.2-201ENST00000615812 383 ntBASIC17.78■□□□□ 0.44
ERVFC1P60507 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.78■□□□□ 0.44
ERVFC1P60507 AL358472.5-202ENST00000641448 1267 ntBASIC17.78■□□□□ 0.44
ERVFC1P60507 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.78■□□□□ 0.44
ERVFC1P60507 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ERVFC1P60507 AC022144.1-201ENST00000602255 1580 ntBASIC17.78■□□□□ 0.44
ERVFC1P60507 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.78■□□□□ 0.44
ERVFC1P60507 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERVFC1P60507 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.77■□□□□ 0.44
ERVFC1P60507 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 SLC25A1P3-201ENST00000395415 828 ntBASIC17.77■□□□□ 0.44
ERVFC1P60507 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.77■□□□□ 0.44
ERVFC1P60507 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.77■□□□□ 0.44
ERVFC1P60507 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.77■□□□□ 0.44
ERVFC1P60507 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ERVFC1P60507 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ERVFC1P60507 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ERVFC1P60507 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ERVFC1P60507 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ERVFC1P60507 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ERVFC1P60507 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.77■□□□□ 0.43
ERVFC1P60507 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ERVFC1P60507 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.77■□□□□ 0.43
ERVFC1P60507 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms