Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
WNT3AP56704 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3AP56704 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.23■□□□□ 0.35
WNT3AP56704 AC073621.1-201ENST00000392730 636 ntBASIC17.23■□□□□ 0.35
WNT3AP56704 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.23■□□□□ 0.35
WNT3AP56704 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.23■□□□□ 0.35
WNT3AP56704 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.23■□□□□ 0.35
WNT3AP56704 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3AP56704 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.23■□□□□ 0.35
WNT3AP56704 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3AP56704 AL160237.2-201ENST00000556165 472 ntBASIC17.23■□□□□ 0.35
WNT3AP56704 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3AP56704 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.23■□□□□ 0.35
WNT3AP56704 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
WNT3AP56704 RNF216P1-203ENST00000404404 2427 ntBASIC17.23■□□□□ 0.35
WNT3AP56704 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.23■□□□□ 0.35
WNT3AP56704 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
WNT3AP56704 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3AP56704 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3AP56704 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3AP56704 AGGF1P2-201ENST00000426656 2106 ntBASIC17.23■□□□□ 0.35
WNT3AP56704 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.22■□□□□ 0.35
WNT3AP56704 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
WNT3AP56704 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
WNT3AP56704 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
WNT3AP56704 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 PI4KAP1-204ENST00000612579 1703 ntBASIC17.22■□□□□ 0.35
WNT3AP56704 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.22■□□□□ 0.35
WNT3AP56704 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.22■□□□□ 0.35
WNT3AP56704 AC136632.2-201ENST00000512891 861 ntBASIC17.22■□□□□ 0.35
WNT3AP56704 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
WNT3AP56704 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.22■□□□□ 0.35
WNT3AP56704 AC105339.3-201ENST00000560043 636 ntBASIC17.22■□□□□ 0.35
WNT3AP56704 AC012640.2-201ENST00000561606 901 ntBASIC17.22■□□□□ 0.35
WNT3AP56704 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
WNT3AP56704 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
WNT3AP56704 FAM215A-202ENST00000632077 792 ntBASIC17.22■□□□□ 0.35
WNT3AP56704 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.22■□□□□ 0.35
WNT3AP56704 AL021920.2-201ENST00000624828 1351 ntBASIC17.22■□□□□ 0.35
WNT3AP56704 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.22■□□□□ 0.35
WNT3AP56704 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
WNT3AP56704 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3AP56704 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.21■□□□□ 0.35
WNT3AP56704 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.21■□□□□ 0.35
WNT3AP56704 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
WNT3AP56704 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
WNT3AP56704 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
WNT3AP56704 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.21■□□□□ 0.35
WNT3AP56704 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
WNT3AP56704 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.21■□□□□ 0.35
WNT3AP56704 RPS15P9-201ENST00000494093 319 ntBASIC17.21■□□□□ 0.35
WNT3AP56704 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.21■□□□□ 0.35
WNT3AP56704 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
WNT3AP56704 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
WNT3AP56704 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.21■□□□□ 0.35
WNT3AP56704 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3AP56704 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.21■□□□□ 0.34
WNT3AP56704 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
WNT3AP56704 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
WNT3AP56704 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
WNT3AP56704 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms