Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS2P54868 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCS2P54868 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS2P54868 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.55■□□□□ 0.72
HMGCS2P54868 AC005034.1-201ENST00000426657 489 ntBASIC19.55■□□□□ 0.72
HMGCS2P54868 AC244107.1-201ENST00000442033 332 ntBASIC19.55■□□□□ 0.72
HMGCS2P54868 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS2P54868 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCS2P54868 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HMGCS2P54868 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.55■□□□□ 0.72
HMGCS2P54868 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS2P54868 MPDU1-223ENST00000582151 728 ntBASIC19.55■□□□□ 0.72
HMGCS2P54868 MIR4453-201ENST00000584019 89 ntBASIC19.55■□□□□ 0.72
HMGCS2P54868 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.55■□□□□ 0.72
HMGCS2P54868 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS2P54868 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 AL035252.4-201ENST00000624174 288 ntBASIC19.55■□□□□ 0.72
HMGCS2P54868 AP001350.2-201ENST00000625104 1094 ntBASIC19.55■□□□□ 0.72
HMGCS2P54868 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HMGCS2P54868 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCS2P54868 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS2P54868 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCS2P54868 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HMGCS2P54868 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCS2P54868 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HMGCS2P54868 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCS2P54868 AC092580.3-201ENST00000430932 139 ntBASIC19.54■□□□□ 0.72
HMGCS2P54868 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
HMGCS2P54868 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
HMGCS2P54868 AL512638.1-201ENST00000457493 794 ntBASIC19.54■□□□□ 0.72
HMGCS2P54868 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCS2P54868 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HMGCS2P54868 AC008761.3-201ENST00000624803 892 ntBASIC19.54■□□□□ 0.72
HMGCS2P54868 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCS2P54868 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.54■□□□□ 0.72
HMGCS2P54868 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCS2P54868 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCS2P54868 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCS2P54868 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HMGCS2P54868 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
HMGCS2P54868 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
HMGCS2P54868 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCS2P54868 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCS2P54868 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCS2P54868 FAM207CP-201ENST00000443486 507 ntBASIC19.53■□□□□ 0.72
HMGCS2P54868 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCS2P54868 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.53■□□□□ 0.72
HMGCS2P54868 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCS2P54868 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HMGCS2P54868 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCS2P54868 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 HTR7P1-202ENST00000624664 4411 ntBASIC19.52■□□□□ 0.72
HMGCS2P54868 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HMGCS2P54868 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCS2P54868 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCS2P54868 AC012645.4-201ENST00000610691 1061 ntBASIC19.52■□□□□ 0.72
HMGCS2P54868 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCS2P54868 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCS2P54868 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCS2P54868 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
HMGCS2P54868 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.52■□□□□ 0.71
HMGCS2P54868 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
HMGCS2P54868 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCS2P54868 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms