Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK1P53667 AL590787.1-201ENST00000568856 1315 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 AC129492.6-201ENST00000611383 1305 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LIMK1P53667 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.81■□□□□ 0.28
LIMK1P53667 AC097493.3-201ENST00000509725 367 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.81■□□□□ 0.28
LIMK1P53667 KRT8P23-201ENST00000560090 1207 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 AC026150.2-201ENST00000564693 1156 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 AL135744.1-201ENST00000565098 629 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK1P53667 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.81■□□□□ 0.28
LIMK1P53667 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.81■□□□□ 0.28
LIMK1P53667 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.81■□□□□ 0.28
LIMK1P53667 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.81■□□□□ 0.28
LIMK1P53667 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.81■□□□□ 0.28
LIMK1P53667 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LIMK1P53667 AC008677.1-201ENST00000519230 1561 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 AC138932.1-201ENST00000534164 6830 ntBASIC16.81■□□□□ 0.28
LIMK1P53667 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LIMK1P53667 AC135776.1-201ENST00000319817 2481 ntBASIC16.8■□□□□ 0.28
LIMK1P53667 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 CU639417.3-201ENST00000624240 1404 ntBASIC16.8■□□□□ 0.28
LIMK1P53667 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LIMK1P53667 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.8■□□□□ 0.28
LIMK1P53667 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK1P53667 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.8■□□□□ 0.28
LIMK1P53667 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK1P53667 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK1P53667 KRT17P7-201ENST00000451704 1104 ntBASIC16.8■□□□□ 0.28
LIMK1P53667 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK1P53667 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.8■□□□□ 0.28
LIMK1P53667 SERBP1P5-201ENST00000510079 1181 ntBASIC16.8■□□□□ 0.28
LIMK1P53667 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.8■□□□□ 0.28
LIMK1P53667 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.8■□□□□ 0.28
LIMK1P53667 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.8■□□□□ 0.28
LIMK1P53667 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK1P53667 AC084121.4-201ENST00000641598 221 ntBASIC16.8■□□□□ 0.28
LIMK1P53667 AF228730.8-201ENST00000642140 221 ntBASIC16.8■□□□□ 0.28
LIMK1P53667 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 AC093010.1-201ENST00000473625 1624 ntBASIC16.8■□□□□ 0.28
LIMK1P53667 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.8■□□□□ 0.28
LIMK1P53667 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LIMK1P53667 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LIMK1P53667 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.8■□□□□ 0.28
LIMK1P53667 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LIMK1P53667 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.8■□□□□ 0.28
LIMK1P53667 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.79■□□□□ 0.28
LIMK1P53667 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.79■□□□□ 0.28
LIMK1P53667 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LIMK1P53667 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.79■□□□□ 0.28
LIMK1P53667 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.79■□□□□ 0.28
LIMK1P53667 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LIMK1P53667 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.79■□□□□ 0.28
LIMK1P53667 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK1P53667 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.79■□□□□ 0.28
LIMK1P53667 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.79■□□□□ 0.28
LIMK1P53667 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.79■□□□□ 0.28
LIMK1P53667 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK1P53667 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.79■□□□□ 0.28
LIMK1P53667 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.79■□□□□ 0.28
LIMK1P53667 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.79■□□□□ 0.28
LIMK1P53667 MIR6799-201ENST00000620297 69 ntBASIC16.79■□□□□ 0.28
LIMK1P53667 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LIMK1P53667 AC108860.2-201ENST00000562760 2183 ntBASIC16.79■□□□□ 0.28
LIMK1P53667 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LIMK1P53667 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms