Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.65■□□□□ 0.58
USP8P40818 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
USP8P40818 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.65■□□□□ 0.58
USP8P40818 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.64■□□□□ 0.58
USP8P40818 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
USP8P40818 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP8P40818 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
USP8P40818 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP8P40818 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP8P40818 AC009336.1-201ENST00000608941 1553 ntBASIC18.64■□□□□ 0.58
USP8P40818 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.64■□□□□ 0.57
USP8P40818 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.64■□□□□ 0.57
USP8P40818 AC003669.1-201ENST00000334569 611 ntBASIC18.64■□□□□ 0.57
USP8P40818 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP8P40818 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.64■□□□□ 0.57
USP8P40818 HCG4P8-203ENST00000443049 980 ntBASIC18.64■□□□□ 0.57
USP8P40818 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 FOSL1P1-201ENST00000511041 816 ntBASIC18.64■□□□□ 0.57
USP8P40818 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.64■□□□□ 0.57
USP8P40818 MIR5100-201ENST00000579544 119 ntBASIC18.64■□□□□ 0.57
USP8P40818 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.64■□□□□ 0.57
USP8P40818 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP8P40818 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
USP8P40818 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP8P40818 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP8P40818 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.63■□□□□ 0.57
USP8P40818 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.63■□□□□ 0.57
USP8P40818 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.63■□□□□ 0.57
USP8P40818 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.63■□□□□ 0.57
USP8P40818 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.63■□□□□ 0.57
USP8P40818 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.63■□□□□ 0.57
USP8P40818 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.63■□□□□ 0.57
USP8P40818 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.63■□□□□ 0.57
USP8P40818 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
USP8P40818 AL591684.3-201ENST00000605187 298 ntBASIC18.63■□□□□ 0.57
USP8P40818 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.63■□□□□ 0.57
USP8P40818 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP8P40818 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
USP8P40818 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP8P40818 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.62■□□□□ 0.57
USP8P40818 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP8P40818 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 AC060834.1-201ENST00000443027 2032 ntBASIC18.62■□□□□ 0.57
USP8P40818 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP8P40818 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 AC103702.1-201ENST00000548801 2630 ntBASIC18.62■□□□□ 0.57
USP8P40818 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.62■□□□□ 0.57
USP8P40818 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP8P40818 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
USP8P40818 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.62■□□□□ 0.57
USP8P40818 AL135999.2-201ENST00000622438 1686 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms