Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN1P35523 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLCN1P35523 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.44■□□□□ 0.7
CLCN1P35523 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN1P35523 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN1P35523 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN1P35523 AC140113.3-201ENST00000605663 199 ntBASIC19.44■□□□□ 0.7
CLCN1P35523 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCN1P35523 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLCN1P35523 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCN1P35523 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCN1P35523 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN1P35523 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCN1P35523 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLCN1P35523 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN1P35523 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.43■□□□□ 0.7
CLCN1P35523 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN1P35523 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN1P35523 AC139887.4-201ENST00000607877 719 ntBASIC19.43■□□□□ 0.7
CLCN1P35523 AC079602.3-201ENST00000623931 403 ntBASIC19.43■□□□□ 0.7
CLCN1P35523 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.43■□□□□ 0.7
CLCN1P35523 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN1P35523 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN1P35523 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN1P35523 AC132938.6-201ENST00000623828 1655 ntBASIC19.43■□□□□ 0.7
CLCN1P35523 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN1P35523 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN1P35523 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.42■□□□□ 0.7
CLCN1P35523 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.42■□□□□ 0.7
CLCN1P35523 RASA4DP-201ENST00000460726 1199 ntBASIC19.42■□□□□ 0.7
CLCN1P35523 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN1P35523 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 AL031432.5-201ENST00000641059 760 ntBASIC19.42■□□□□ 0.7
CLCN1P35523 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CLCN1P35523 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN1P35523 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN1P35523 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms