Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.16■□□□□ 0.34
LSP1P33241 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LSP1P33241 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.16■□□□□ 0.34
LSP1P33241 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LSP1P33241 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.15■□□□□ 0.34
LSP1P33241 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LSP1P33241 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LSP1P33241 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.15■□□□□ 0.34
LSP1P33241 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
LSP1P33241 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.15■□□□□ 0.34
LSP1P33241 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.15■□□□□ 0.34
LSP1P33241 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 SEC1P-202ENST00000473944 940 ntBASIC17.15■□□□□ 0.34
LSP1P33241 AC097488.1-201ENST00000507834 756 ntBASIC17.15■□□□□ 0.34
LSP1P33241 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.15■□□□□ 0.34
LSP1P33241 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
LSP1P33241 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.15■□□□□ 0.34
LSP1P33241 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.15■□□□□ 0.34
LSP1P33241 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LSP1P33241 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSP1P33241 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.14■□□□□ 0.34
LSP1P33241 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.14■□□□□ 0.33
LSP1P33241 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LSP1P33241 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.14■□□□□ 0.33
LSP1P33241 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.14■□□□□ 0.33
LSP1P33241 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.14■□□□□ 0.33
LSP1P33241 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LSP1P33241 FAM197Y4-202ENST00000622692 608 ntBASIC17.14■□□□□ 0.33
LSP1P33241 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
LSP1P33241 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LSP1P33241 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LSP1P33241 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.14■□□□□ 0.33
LSP1P33241 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LSP1P33241 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSP1P33241 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LSP1P33241 AL009178.2-201ENST00000597278 2719 ntBASIC17.13■□□□□ 0.33
LSP1P33241 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.13■□□□□ 0.33
LSP1P33241 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.13■□□□□ 0.33
LSP1P33241 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.13■□□□□ 0.33
LSP1P33241 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.13■□□□□ 0.33
LSP1P33241 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.13■□□□□ 0.33
LSP1P33241 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.13■□□□□ 0.33
LSP1P33241 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSP1P33241 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.13■□□□□ 0.33
LSP1P33241 AC112698.1-201ENST00000510299 916 ntBASIC17.13■□□□□ 0.33
LSP1P33241 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LSP1P33241 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms