Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.68□□□□□ -0.06
CD40P25942 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CD40P25942 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.67□□□□□ -0.06
CD40P25942 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.67□□□□□ -0.06
CD40P25942 ACTG1P14-201ENST00000446382 1122 ntBASIC14.67□□□□□ -0.06
CD40P25942 DNAJB3-202ENST00000449667 1266 ntBASIC14.67□□□□□ -0.06
CD40P25942 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.67□□□□□ -0.06
CD40P25942 AL031432.2-201ENST00000566714 459 ntBASIC14.67□□□□□ -0.06
CD40P25942 AL928711.1-201ENST00000570165 459 ntBASIC14.67□□□□□ -0.06
CD40P25942 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.67□□□□□ -0.06
CD40P25942 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.67□□□□□ -0.06
CD40P25942 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CD40P25942 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.67□□□□□ -0.06
CD40P25942 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CD40P25942 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD40P25942 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CD40P25942 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CD40P25942 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.66□□□□□ -0.06
CD40P25942 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 FER1L4-210ENST00000615531 5998 ntBASIC14.66□□□□□ -0.06
CD40P25942 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.66□□□□□ -0.06
CD40P25942 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40P25942 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CD40P25942 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.66□□□□□ -0.06
CD40P25942 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40P25942 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.66□□□□□ -0.06
CD40P25942 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40P25942 AP002472.1-201ENST00000577490 586 ntBASIC14.66□□□□□ -0.06
CD40P25942 MIR4515-201ENST00000584082 81 ntBASIC14.66□□□□□ -0.06
CD40P25942 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 LINC00896-202ENST00000609602 2128 ntBASIC14.66□□□□□ -0.06
CD40P25942 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.66□□□□□ -0.06
CD40P25942 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40P25942 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD40P25942 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.66□□□□□ -0.06
CD40P25942 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CD40P25942 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CD40P25942 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CD40P25942 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.65□□□□□ -0.06
CD40P25942 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD40P25942 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.65□□□□□ -0.06
CD40P25942 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.65□□□□□ -0.06
CD40P25942 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms