Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC20.38■□□□□ 0.85
NCLP19338 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
NCLP19338 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NCLP19338 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NCLP19338 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.37■□□□□ 0.85
NCLP19338 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.37■□□□□ 0.85
NCLP19338 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NCLP19338 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
NCLP19338 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.37■□□□□ 0.85
NCLP19338 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.37■□□□□ 0.85
NCLP19338 AL136038.4-201ENST00000603606 1261 ntBASIC20.37■□□□□ 0.85
NCLP19338 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NCLP19338 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.37■□□□□ 0.85
NCLP19338 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NCLP19338 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC20.37■□□□□ 0.85
NCLP19338 BX276092.7-203ENST00000637198 1536 ntBASIC20.37■□□□□ 0.85
NCLP19338 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCLP19338 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 AC132872.4-202ENST00000622924 2756 ntBASIC20.36■□□□□ 0.85
NCLP19338 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.36■□□□□ 0.85
NCLP19338 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 AL391807.1-203ENST00000604392 2365 ntBASIC20.36■□□□□ 0.85
NCLP19338 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 HBZP1-201ENST00000354915 429 ntBASIC20.36■□□□□ 0.85
NCLP19338 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 TSPY12P-201ENST00000421279 868 ntBASIC20.36■□□□□ 0.85
NCLP19338 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.36■□□□□ 0.85
NCLP19338 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.36■□□□□ 0.85
NCLP19338 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.36■□□□□ 0.85
NCLP19338 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.36■□□□□ 0.85
NCLP19338 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
NCLP19338 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.36■□□□□ 0.85
NCLP19338 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.36■□□□□ 0.85
NCLP19338 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.36■□□□□ 0.85
NCLP19338 AC079602.3-201ENST00000623931 403 ntBASIC20.36■□□□□ 0.85
NCLP19338 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NCLP19338 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NCLP19338 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCLP19338 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLP19338 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLP19338 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.35■□□□□ 0.85
NCLP19338 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
NCLP19338 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLP19338 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLP19338 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 SPDYE13P-201ENST00000445314 798 ntBASIC20.35■□□□□ 0.85
NCLP19338 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLP19338 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.35■□□□□ 0.85
NCLP19338 KRT89P-201ENST00000620027 1478 ntBASIC20.35■□□□□ 0.85
NCLP19338 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCLP19338 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms