Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 LINC00895-201ENST00000629028 1637 ntBASIC17.12■□□□□ 0.33
MMP2P08253 PRSS29P-201ENST00000440800 595 ntBASIC17.12■□□□□ 0.33
MMP2P08253 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP2P08253 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.12■□□□□ 0.33
MMP2P08253 AC034105.1-201ENST00000563488 319 ntBASIC17.12■□□□□ 0.33
MMP2P08253 AC145285.3-201ENST00000564603 959 ntBASIC17.12■□□□□ 0.33
MMP2P08253 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP2P08253 AC010654.1-201ENST00000615722 808 ntBASIC17.12■□□□□ 0.33
MMP2P08253 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP2P08253 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP2P08253 SLC22A20-204ENST00000530038 1673 ntBASIC17.12■□□□□ 0.33
MMP2P08253 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MMP2P08253 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP2P08253 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MMP2P08253 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP2P08253 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP2P08253 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP2P08253 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MMP2P08253 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.11■□□□□ 0.33
MMP2P08253 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MMP2P08253 IGLL3P-201ENST00000412472 434 ntBASIC17.11■□□□□ 0.33
MMP2P08253 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.11■□□□□ 0.33
MMP2P08253 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
MMP2P08253 PMS2P1-201ENST00000431037 1228 ntBASIC17.11■□□□□ 0.33
MMP2P08253 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP2P08253 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 SLC25A1P1-201ENST00000528351 927 ntBASIC17.11■□□□□ 0.33
MMP2P08253 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP2P08253 MIR4492-201ENST00000581627 80 ntBASIC17.11■□□□□ 0.33
MMP2P08253 MPDU1-223ENST00000582151 728 ntBASIC17.11■□□□□ 0.33
MMP2P08253 Z83851.2-201ENST00000609564 659 ntBASIC17.11■□□□□ 0.33
MMP2P08253 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 AC129492.6-201ENST00000611383 1305 ntBASIC17.11■□□□□ 0.33
MMP2P08253 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP2P08253 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 AL391256.1-201ENST00000443260 1855 ntBASIC17.11■□□□□ 0.33
MMP2P08253 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP2P08253 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MMP2P08253 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP2P08253 AL603756.1-201ENST00000606511 2163 ntBASIC17.11■□□□□ 0.33
MMP2P08253 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP2P08253 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP2P08253 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP2P08253 AL590627.1-203ENST00000421194 1026 ntBASIC17.1■□□□□ 0.33
MMP2P08253 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP2P08253 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP2P08253 RPL13AP23-201ENST00000480739 586 ntBASIC17.1■□□□□ 0.33
MMP2P08253 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP2P08253 MIR4751-201ENST00000578027 74 ntBASIC17.1■□□□□ 0.33
MMP2P08253 AC013467.2-201ENST00000605472 835 ntBASIC17.1■□□□□ 0.33
MMP2P08253 ACTL9-202ENST00000612068 1252 ntBASIC17.1■□□□□ 0.33
MMP2P08253 BX640515.1-201ENST00000617215 977 ntBASIC17.1■□□□□ 0.33
MMP2P08253 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms