Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 AL589182.2-201ENST00000619332 1049 ntBASIC15.71■□□□□ 0.11
THBS1P07996 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.71■□□□□ 0.11
THBS1P07996 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THBS1P07996 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.71■□□□□ 0.11
THBS1P07996 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
THBS1P07996 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
THBS1P07996 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
THBS1P07996 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.71■□□□□ 0.1
THBS1P07996 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
THBS1P07996 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
THBS1P07996 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
THBS1P07996 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.7■□□□□ 0.1
THBS1P07996 NKAPP1-205ENST00000585790 367 ntBASIC15.7■□□□□ 0.1
THBS1P07996 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 TERC-201ENST00000602385 541 ntBASIC15.7■□□□□ 0.1
THBS1P07996 AL732292.2-201ENST00000609649 430 ntBASIC15.7■□□□□ 0.1
THBS1P07996 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THBS1P07996 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.7■□□□□ 0.1
THBS1P07996 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.7■□□□□ 0.1
THBS1P07996 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
THBS1P07996 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.69■□□□□ 0.1
THBS1P07996 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 LINC00895-201ENST00000629028 1637 ntBASIC15.69■□□□□ 0.1
THBS1P07996 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.69■□□□□ 0.1
THBS1P07996 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.69■□□□□ 0.1
THBS1P07996 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.69■□□□□ 0.1
THBS1P07996 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.69■□□□□ 0.1
THBS1P07996 AC104692.2-201ENST00000603054 253 ntBASIC15.69■□□□□ 0.1
THBS1P07996 AL139424.1-201ENST00000607572 797 ntBASIC15.69■□□□□ 0.1
THBS1P07996 AL355877.3-201ENST00000622820 899 ntBASIC15.69■□□□□ 0.1
THBS1P07996 AC243591.1-201ENST00000452967 1364 ntBASIC15.69■□□□□ 0.1
THBS1P07996 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.69■□□□□ 0.1
THBS1P07996 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
THBS1P07996 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
THBS1P07996 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms