Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MTCL1P1-201ENST00000446207 792 ntBASIC19.18■□□□□ 0.66
TPM3P06753 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM3P06753 IGHV3-52-201ENST00000519770 353 ntBASIC19.18■□□□□ 0.66
TPM3P06753 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM3P06753 AC141257.4-201ENST00000634557 245 ntBASIC19.18■□□□□ 0.66
TPM3P06753 AC136944.6-201ENST00000634818 245 ntBASIC19.18■□□□□ 0.66
TPM3P06753 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM3P06753 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM3P06753 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.18■□□□□ 0.66
TPM3P06753 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TPM3P06753 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TPM3P06753 SNORA78-201ENST00000459373 127 ntBASIC19.17■□□□□ 0.66
TPM3P06753 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.17■□□□□ 0.66
TPM3P06753 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TPM3P06753 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TPM3P06753 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPM3P06753 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM3P06753 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM3P06753 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 MTHFR-217ENST00000641820 1569 ntBASIC19.16■□□□□ 0.66
TPM3P06753 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.16■□□□□ 0.66
TPM3P06753 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM3P06753 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.16■□□□□ 0.66
TPM3P06753 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.16■□□□□ 0.66
TPM3P06753 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM3P06753 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.16■□□□□ 0.66
TPM3P06753 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TPM3P06753 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.16■□□□□ 0.66
TPM3P06753 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM3P06753 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPM3P06753 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.16■□□□□ 0.66
TPM3P06753 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TPM3P06753 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPM3P06753 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms