Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 AC098831.1-202ENST00000438821 336 ntBASIC17.28■□□□□ 0.36
HLA-DQB2P05538 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DQB2P05538 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.27■□□□□ 0.36
HLA-DQB2P05538 PGM5P2-202ENST00000637225 1043 ntBASIC17.27■□□□□ 0.36
HLA-DQB2P05538 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DQB2P05538 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 AL021920.2-201ENST00000624828 1351 ntBASIC17.27■□□□□ 0.35
HLA-DQB2P05538 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DQB2P05538 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 AC108073.2-201ENST00000464002 357 ntBASIC17.26■□□□□ 0.35
HLA-DQB2P05538 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 REXO1L3P-201ENST00000622202 1288 ntBASIC17.26■□□□□ 0.35
HLA-DQB2P05538 KRT8P49-201ENST00000604166 1432 ntBASIC17.26■□□□□ 0.35
HLA-DQB2P05538 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 FLJ38576-201ENST00000623820 2459 ntBASIC17.26■□□□□ 0.35
HLA-DQB2P05538 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 AL645728.1-201ENST00000366221 2101 ntBASIC17.26■□□□□ 0.35
HLA-DQB2P05538 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HLA-DQB2P05538 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms