Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
TOP3BO95985 AC008894.3-201ENST00000624324 3103 ntBASIC17.51■□□□□ 0.39
TOP3BO95985 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 PCDHB19P-201ENST00000570871 2371 ntBASIC17.51■□□□□ 0.39
TOP3BO95985 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TOP3BO95985 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.5■□□□□ 0.39
TOP3BO95985 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
TOP3BO95985 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 AC105020.1-201ENST00000435356 2205 ntBASIC17.5■□□□□ 0.39
TOP3BO95985 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TOP3BO95985 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.5■□□□□ 0.39
TOP3BO95985 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.5■□□□□ 0.39
TOP3BO95985 HLA-J-202ENST00000469281 1241 ntBASIC17.5■□□□□ 0.39
TOP3BO95985 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.5■□□□□ 0.39
TOP3BO95985 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.5■□□□□ 0.39
TOP3BO95985 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.5■□□□□ 0.39
TOP3BO95985 MTDHP5-201ENST00000598980 586 ntBASIC17.5■□□□□ 0.39
TOP3BO95985 AC025062.2-201ENST00000605477 670 ntBASIC17.5■□□□□ 0.39
TOP3BO95985 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
TOP3BO95985 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TOP3BO95985 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.5■□□□□ 0.39
TOP3BO95985 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 AC005915.1-201ENST00000624912 2018 ntBASIC17.5■□□□□ 0.39
TOP3BO95985 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TOP3BO95985 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TOP3BO95985 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP3BO95985 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.5■□□□□ 0.39
TOP3BO95985 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 AC046185.3-201ENST00000623228 1824 ntBASIC17.49■□□□□ 0.39
TOP3BO95985 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
TOP3BO95985 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
TOP3BO95985 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP3BO95985 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 AP005117.1-201ENST00000584346 1413 ntBASIC17.49■□□□□ 0.39
TOP3BO95985 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP3BO95985 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP3BO95985 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP3BO95985 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.49■□□□□ 0.39
TOP3BO95985 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
TOP3BO95985 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.49■□□□□ 0.39
TOP3BO95985 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP3BO95985 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.49■□□□□ 0.39
TOP3BO95985 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 SNHG9-202ENST00000564014 471 ntBASIC17.49■□□□□ 0.39
TOP3BO95985 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.49■□□□□ 0.39
TOP3BO95985 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP3BO95985 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TOP3BO95985 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.49■□□□□ 0.39
TOP3BO95985 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.49■□□□□ 0.39
TOP3BO95985 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TOP3BO95985 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP3BO95985 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP3BO95985 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TOP3BO95985 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 PCDH8P1-201ENST00000428983 2773 ntBASIC17.48■□□□□ 0.39
TOP3BO95985 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TOP3BO95985 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP3BO95985 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms