Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TRUB2O95900 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.86■□□□□ 0.45
TRUB2O95900 RNA5SP415-201ENST00000517246 115 ntBASIC17.86■□□□□ 0.45
TRUB2O95900 IGHV3-65-201ENST00000523210 341 ntBASIC17.86■□□□□ 0.45
TRUB2O95900 UNC93B6-202ENST00000528242 690 ntBASIC17.86■□□□□ 0.45
TRUB2O95900 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.86■□□□□ 0.45
TRUB2O95900 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
TRUB2O95900 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.86■□□□□ 0.45
TRUB2O95900 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
TRUB2O95900 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRUB2O95900 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRUB2O95900 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TRUB2O95900 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRUB2O95900 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRUB2O95900 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRUB2O95900 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.85■□□□□ 0.45
TRUB2O95900 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRUB2O95900 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRUB2O95900 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRUB2O95900 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.85■□□□□ 0.45
TRUB2O95900 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.85■□□□□ 0.45
TRUB2O95900 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
TRUB2O95900 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.85■□□□□ 0.45
TRUB2O95900 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.85■□□□□ 0.45
TRUB2O95900 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.85■□□□□ 0.45
TRUB2O95900 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.85■□□□□ 0.45
TRUB2O95900 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRUB2O95900 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
TRUB2O95900 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRUB2O95900 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.85■□□□□ 0.45
TRUB2O95900 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.85■□□□□ 0.45
TRUB2O95900 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRUB2O95900 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRUB2O95900 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.85■□□□□ 0.45
TRUB2O95900 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRUB2O95900 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRUB2O95900 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRUB2O95900 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.84■□□□□ 0.45
TRUB2O95900 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRUB2O95900 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.84■□□□□ 0.45
TRUB2O95900 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRUB2O95900 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 PAWRP1-201ENST00000451083 565 ntBASIC17.84■□□□□ 0.45
TRUB2O95900 RPL13AP23-201ENST00000480739 586 ntBASIC17.84■□□□□ 0.45
TRUB2O95900 SLC25A1P1-201ENST00000528351 927 ntBASIC17.84■□□□□ 0.45
TRUB2O95900 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.84■□□□□ 0.45
TRUB2O95900 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.84■□□□□ 0.45
TRUB2O95900 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.84■□□□□ 0.45
TRUB2O95900 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.84■□□□□ 0.45
TRUB2O95900 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRUB2O95900 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRUB2O95900 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRUB2O95900 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.84■□□□□ 0.45
TRUB2O95900 AC084018.2-201ENST00000613093 2607 ntBASIC17.84■□□□□ 0.45
TRUB2O95900 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.84■□□□□ 0.45
TRUB2O95900 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRUB2O95900 RNF216P1-203ENST00000404404 2427 ntBASIC17.83■□□□□ 0.45
TRUB2O95900 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms