Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN3O95197 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RTN3O95197 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN3O95197 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 AC023274.1-201ENST00000418278 595 ntBASIC17.97■□□□□ 0.47
RTN3O95197 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN3O95197 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.97■□□□□ 0.47
RTN3O95197 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN3O95197 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RTN3O95197 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.97■□□□□ 0.47
RTN3O95197 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN3O95197 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
RTN3O95197 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN3O95197 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RTN3O95197 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN3O95197 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN3O95197 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN3O95197 AC129492.6-201ENST00000611383 1305 ntBASIC17.97■□□□□ 0.47
RTN3O95197 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN3O95197 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN3O95197 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN3O95197 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 EGFEM1P-202ENST00000431685 1563 ntBASIC17.96■□□□□ 0.47
RTN3O95197 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN3O95197 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 YBX2P1-201ENST00000394192 760 ntBASIC17.96■□□□□ 0.47
RTN3O95197 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN3O95197 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.96■□□□□ 0.47
RTN3O95197 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.96■□□□□ 0.47
RTN3O95197 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 CXCL1P1-201ENST00000502804 216 ntBASIC17.96■□□□□ 0.47
RTN3O95197 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.96■□□□□ 0.47
RTN3O95197 AC018845.2-201ENST00000568326 409 ntBASIC17.96■□□□□ 0.47
RTN3O95197 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RTN3O95197 MTDHP5-201ENST00000598980 586 ntBASIC17.96■□□□□ 0.47
RTN3O95197 GPALPP1-207ENST00000611650 899 ntBASIC17.96■□□□□ 0.47
RTN3O95197 AC010507.1-201ENST00000633895 436 ntBASIC17.96■□□□□ 0.47
RTN3O95197 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTN3O95197 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN3O95197 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTN3O95197 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.96■□□□□ 0.47
RTN3O95197 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RTN3O95197 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.96■□□□□ 0.46
RTN3O95197 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN3O95197 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
RTN3O95197 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RTN3O95197 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN3O95197 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN3O95197 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN3O95197 AC093525.9-201ENST00000624961 1746 ntBASIC17.95■□□□□ 0.46
RTN3O95197 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN3O95197 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RTN3O95197 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN3O95197 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN3O95197 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RTN3O95197 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN3O95197 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN3O95197 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.95■□□□□ 0.46
RTN3O95197 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN3O95197 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN3O95197 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.95■□□□□ 0.46
RTN3O95197 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN3O95197 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms