Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCAF4O95104 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCAF4O95104 LINC02012-201ENST00000608206 1725 ntBASIC14.06□□□□□ -0.16
SCAF4O95104 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.06□□□□□ -0.16
SCAF4O95104 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCAF4O95104 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SCAF4O95104 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SCAF4O95104 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCAF4O95104 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SCAF4O95104 AC073508.3-201ENST00000619697 1419 ntBASIC14.06□□□□□ -0.16
SCAF4O95104 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.06□□□□□ -0.16
SCAF4O95104 KRT89P-201ENST00000620027 1478 ntBASIC14.06□□□□□ -0.16
SCAF4O95104 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCAF4O95104 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCAF4O95104 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 LYSMD4-203ENST00000378904 2122 ntBASIC14.05□□□□□ -0.16
SCAF4O95104 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.05□□□□□ -0.16
SCAF4O95104 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 AP000523.1-201ENST00000398242 1049 ntBASIC14.05□□□□□ -0.16
SCAF4O95104 PVRIG2P-201ENST00000435460 978 ntBASIC14.05□□□□□ -0.16
SCAF4O95104 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SCAF4O95104 COX11P1-201ENST00000489116 835 ntBASIC14.05□□□□□ -0.16
SCAF4O95104 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 AC124947.2-201ENST00000547118 1133 ntBASIC14.05□□□□□ -0.16
SCAF4O95104 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.05□□□□□ -0.16
SCAF4O95104 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.05□□□□□ -0.16
SCAF4O95104 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SCAF4O95104 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.05□□□□□ -0.16
SCAF4O95104 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SCAF4O95104 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCAF4O95104 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.04□□□□□ -0.16
SCAF4O95104 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 AK4P3-201ENST00000418260 669 ntBASIC14.04□□□□□ -0.16
SCAF4O95104 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.04□□□□□ -0.16
SCAF4O95104 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.04□□□□□ -0.16
SCAF4O95104 AL139327.4-201ENST00000612362 153 ntBASIC14.04□□□□□ -0.16
SCAF4O95104 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SCAF4O95104 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.04□□□□□ -0.16
SCAF4O95104 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCAF4O95104 AC023824.1-201ENST00000562945 2975 ntBASIC14.04□□□□□ -0.16
SCAF4O95104 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCAF4O95104 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SCAF4O95104 AC005915.1-201ENST00000624912 2018 ntBASIC14.03□□□□□ -0.16
SCAF4O95104 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCAF4O95104 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms